Summary for ENCSR377PMZ
doi:10.17989/ENCSR377PMZ
Summary
- Status
- released
- Description
- REMC Epigenome (Class 2) for hESC Derived CD184+ Endoderm Cultured Cells using donors/samples:262;263
- Donor diversity
- single
- Assay
- polyA plus RNA-seq, RRBS, whole-genome shotgun bisulfite sequencing, ChIP-seq
- Target
- H3K27me3, H3K4me1, H3K27ac, H3K36me3, H3K9ac, H3K9me3, H3K4me3
- Biosample summary
- Homo sapiens endodermal cell originated from HUES64
- Diseases
- Not reported
Attribution
Roadmap Epigenomics Mapping Consortium
- Lab
- Anshul Kundaje, Stanford
- Award
- U01DA025956 (Roadmap Epigenomics, Baylor)
- Project
- Roadmap
- Aliases
- roadmap-epigenomics:E011
- External resources
- Tags
Experiments in ENCSR377PMZ
Experiments
15 experiments
Accession | Assay | Target | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|
| ENCSR002CTR | polyA plus RNA-seq | Homo sapiens endodermal cell originated from HUES64 | Bradley Bernstein, Broad | released | ||
| ENCSR090LPS | RRBS | Homo sapiens endodermal cell originated from HUES64 | Bradley Bernstein, Broad | archived | ||
| ENCSR457CPG | whole-genome shotgun bisulfite sequencing | Homo sapiens endodermal cell originated from HUES64 | Bradley Bernstein, Broad | released | ||
| ENCSR194TFK | ChIP-seq | H3K4me1 | Homo sapiens endodermal cell originated from HUES64 | Bradley Bernstein, Broad | released | |
| ENCSR677EZB | ChIP-seq | H3K36me3 | Homo sapiens endodermal cell originated from HUES64 | Bradley Bernstein, Broad | released | |
| ENCSR951GPI | RRBS | Homo sapiens endodermal cell originated from HUES64 | Bradley Bernstein, Broad | archived | ||
| ENCSR695DDA | ChIP-seq | H3K9ac | Homo sapiens endodermal cell originated from HUES64 | Bradley Bernstein, Broad | released | |
| ENCSR638MSX | polyA plus RNA-seq | Homo sapiens endodermal cell originated from HUES64 | Bradley Bernstein, Broad | archived | ||
| ENCSR273IYV | ChIP-seq | H3K27me3 | Homo sapiens endodermal cell originated from HUES64 | Bradley Bernstein, Broad | released | |
| ENCSR446ZCY | ChIP-seq | H3K4me3 | Homo sapiens endodermal cell originated from HUES64 | Bradley Bernstein, Broad | released | |
| ENCSR037RJI | ChIP-seq | H3K4me1 | Homo sapiens endodermal cell originated from HUES64 | Bradley Bernstein, Broad | released | |
| ENCSR472PBS | polyA plus RNA-seq | Homo sapiens endodermal cell originated from HUES64 | Bradley Bernstein, Broad | released | ||
| ENCSR128BHP | whole-genome shotgun bisulfite sequencing | Homo sapiens endodermal cell originated from HUES64 | Bradley Bernstein, Broad | released | ||
| ENCSR200ETW | ChIP-seq | H3K27ac | Homo sapiens endodermal cell originated from HUES64 | Bradley Bernstein, Broad | released | |
| ENCSR823BHO | ChIP-seq | H3K9me3 | Homo sapiens endodermal cell originated from HUES64 | Bradley Bernstein, Broad | released |
Control experiments
2 control experiments
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR290OKG | input library | Homo sapiens endodermal cell originated from HUES64 | Bradley Bernstein, Broad | released | |
| ENCSR650EVQ | input library | Homo sapiens endodermal cell originated from HUES64 | Bradley Bernstein, Broad | released |