Summary for ENCSR370JPV
doi:10.17989/ENCSR370JPV
Summary
- Status
- released
- Description
- REMC Epigenome (Class 2) for Ganglion Eminence Derived Primary Cultured Neurospheres using donors/samples:HuFNSC02
- Donor diversity
- single
- Assay
- whole-genome shotgun bisulfite sequencing, MeDIP-seq, polyA plus RNA-seq, ChIP-seq, MRE-seq, microRNA-seq
- Target
- H3K27me3, H3K4me1, H3K36me3, Methylcytidine, H3K9me3, H3K4me3
- Biosample summary
- Homo sapiens neurosphere female embryo (17 weeks) originated from ganglionic eminence
- Diseases
- Not reported
Attribution
Roadmap Epigenomics Mapping Consortium
- Lab
- Anshul Kundaje, Stanford
- Award
- U01DA025956 (Roadmap Epigenomics, Baylor)
- Project
- Roadmap
- Aliases
- roadmap-epigenomics:E054
- External resources
Experiments in ENCSR370JPV
Experiments
10 experiments
Accession | Assay | Target | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|
| ENCSR743KHU | microRNA-seq | Homo sapiens neurosphere female embryo (17 weeks) originated from ganglionic eminence | Joseph Costello, UCSF | released | ||
| ENCSR451KXG | polyA plus RNA-seq | Homo sapiens neurosphere female embryo (17 weeks) originated from ganglionic eminence | Joseph Costello, UCSF | archived | ||
| ENCSR199NIX | whole-genome shotgun bisulfite sequencing | Homo sapiens neurosphere female embryo (17 weeks) originated from ganglionic eminence | Joseph Costello, UCSF | archived | ||
| ENCSR874JKL | MRE-seq | Homo sapiens neurosphere female embryo (17 weeks) originated from ganglionic eminence | Joseph Costello, UCSF | archived | ||
| ENCSR115WGE | MeDIP-seq | Methylcytidine | Homo sapiens neurosphere female embryo (17 weeks) originated from ganglionic eminence | Joseph Costello, UCSF | archived | |
| ENCSR741FTW | ChIP-seq | H3K9me3 | Homo sapiens neurosphere female embryo (17 weeks) originated from ganglionic eminence | Joseph Costello, UCSF | released | |
| ENCSR127MFA | ChIP-seq | H3K36me3 | Homo sapiens neurosphere female embryo (17 weeks) originated from ganglionic eminence | Joseph Costello, UCSF | released | |
| ENCSR130PLZ | ChIP-seq | H3K4me3 | Homo sapiens neurosphere female embryo (17 weeks) originated from ganglionic eminence | Joseph Costello, UCSF | released | |
| ENCSR444TQQ | ChIP-seq | H3K27me3 | Homo sapiens neurosphere female embryo (17 weeks) originated from ganglionic eminence | Joseph Costello, UCSF | released | |
| ENCSR453XEY | ChIP-seq | H3K4me1 | Homo sapiens neurosphere female embryo (17 weeks) originated from ganglionic eminence | Joseph Costello, UCSF | released |
Control experiments
1 control experiment
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR879FMB | input library | Homo sapiens neurosphere female embryo (17 weeks) originated from ganglionic eminence | Joseph Costello, UCSF | released |