Kundaje lab ATAC-seq pipeline

Status
released
Title
Kundaje lab ATAC-seq pipeline
Assays
ATAC-seq
Description
ATAC-seq pipeline for ENCODE data, developed by Anshul Kundaje and the ENCODE DAC
Lab
ENCODE Consortium Analysis Working Group
Award PI
Zhiping Weng, UMass

Pipeline schematic

Documents

pipeline protocol
Description: Kundaje lab ATAC-seq pipeline specifications - updated July 11th 2017
Submitted by
Aditi Narayanan
Lab
ENCODE Consortium Analysis Working Group
Grant
ENCODE