Summary for ENCSR979QQN
Summary
- Status
- released
- Description
- Functional characterization series for the gene target ERP29.
- Donor diversity
- single
- Assay
- Flow-FISH CRISPR screen
- Biosample summary
- Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for chr12:110726151-112325750
- Diseases
- Not reported
- Treatments
- doxycycline
- Elements references
- ENCSR150KND (GRCh38 chr12:110726151-112325750)
- Tiling modality
- full tiling
Attribution
ENCODE4 project
- Lab
- Pardis Sabeti, Broad
- Award
- UM1HG009435 (Pardis Sabeti, Broad)
- Project
- ENCODE
- Aliases
- pardis-sabeti:ERP29_series_ERP29
- External resources
- None submitted
Experiments in ENCSR979QQN
Experiments
2 experiments
Accession | Assay | Examined loci | Biosample summary | Lab | Status | Cart |
---|---|---|---|---|---|---|
ENCSR538TGD | Flow-FISH CRISPR screen | ERP29 (90-100%) | Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for chr12:110726151-112325750 | Pardis Sabeti, Broad | released | |
ENCSR129IST | Flow-FISH CRISPR screen | ERP29 (0-10%) | Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for chr12:110726151-112325750 | Pardis Sabeti, Broad | released |
Control experiments
2 control experiments
Accession | Control type | Biosample summary | Lab | Status | Cart |
---|---|---|---|---|---|
ENCSR591JER | control | Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for chr12:110726151-112325750 | Pardis Sabeti, Broad | released | |
ENCSR418FSN | control | Pardis Sabeti, Broad | released |