Summary for ENCSR918PMD

Summary

Status: released
Donor diversity: single
Assay: proliferation CRISPR screen
Biosample summary: K562 cell line genetically modified (insertion) using transduction, genetically modified (CRISPRi) using CRISPR
Diseases: Not reported
Elements references: ENCSR488FGH
Tiling modality: peak tiling

Attribution

Lab: Bing Ren, UCSD
Award: UM1HG009402 (Yin Shen, UCSF)
Project: ENCODE
Aliases: bing-ren:BC83S_K562
External resources: None submitted

Experiments

2 experiments

Accession	Assay	Examined loci	Biosample summary	Lab	Status	Cart
ENCSR432QJF	proliferation CRISPR screen		Homo sapiens K562, 0 days post-nucleic acid delivery time genetically modified (insertion) using transduction, using CRISPRi (pgRNA)	Bing Ren, UCSD	released
ENCSR536ZNM	proliferation CRISPR screen		Homo sapiens K562, 14 days post-nucleic acid delivery time genetically modified (insertion) using transduction, using CRISPRi (pgRNA)	Bing Ren, UCSD	released

Control experiments

1 control experiment

Accession	Control type	Biosample summary	Lab	Status	Cart
ENCSR469EDZ	control		Bing Ren, UCSD	released

Files

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Displaying 2 of 2 files

Lab custom GRCh38 (ENCAN263TCM) processed data (2 Files)
Accession	File type	Output type	Genome assembly	Date added	File size	File status
ENCFF912HFE	tsv	guide quantifications	GRCh38	2021-12-16	17.3 MB	released
ENCFF188WSP	tsv	element quantifications	GRCh38	2021-12-16	15.7 kB	released