Summary for ENCSR793WTM

Summary

Status
released
Description
Functional characterization series for the gene target CAPRIN1.
Donor diversity
single
Assay
Flow-FISH CRISPR screen
Biosample summary
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for chr11:33064196-34664119
Diseases
Not reported
Treatments
doxycycline
Elements references
Tiling modality
full tiling

Attribution

ENCODE4 project
Lab
Pardis Sabeti, Broad
Award
UM1HG009435 (Pardis Sabeti, Broad)
Project
ENCODE
Aliases
pardis-sabeti:CAPRIN1_series_LMO2
External resources
None submitted

Experiments in ENCSR793WTM

Experiments
2 experiments
Accession
Assay
Examined loci
Biosample summary
Lab
Status
Cart
ENCSR473SLBFlow-FISH CRISPR screenCAPRIN1 (90-100%)Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for chr11:33064196-34664119Pardis Sabeti, Broad
released
ENCSR450RRSFlow-FISH CRISPR screenCAPRIN1 (0-10%)Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for chr11:33064196-34664119Pardis Sabeti, Broad
released
Control experiments
2 control experiments
Accession
Control type
Biosample summary
Lab
Status
Cart
ENCSR327XSOcontrolHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for chr11:33064196-34664119Pardis Sabeti, Broad
released
ENCSR321OIBcontrolPardis Sabeti, Broad
released