Summary for ENCSR793WTM
Summary
- Status
- released
- Description
- Functional characterization series for the gene target CAPRIN1.
- Donor diversity
- single
- Assay
- Flow-FISH CRISPR screen
- Biosample summary
- Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for chr11:33064196-34664119
- Diseases
- Not reported
- Treatments
- doxycycline
- Elements references
- ENCSR907NZB (GRCh38 chr11:33064196-34664119)
- Tiling modality
- full tiling
Attribution
ENCODE4 project
- Lab
- Pardis Sabeti, Broad
- Award
- UM1HG009435 (Pardis Sabeti, Broad)
- Project
- ENCODE
- Aliases
- pardis-sabeti:CAPRIN1_series_LMO2
- External resources
- None submitted
Experiments in ENCSR793WTM
Experiments
2 experiments
Accession | Assay | Examined loci | Biosample summary | Lab | Status | Cart |
---|---|---|---|---|---|---|
ENCSR473SLB | Flow-FISH CRISPR screen | CAPRIN1 (90-100%) | Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for chr11:33064196-34664119 | Pardis Sabeti, Broad | released | |
ENCSR450RRS | Flow-FISH CRISPR screen | CAPRIN1 (0-10%) | Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for chr11:33064196-34664119 | Pardis Sabeti, Broad | released |
Control experiments
2 control experiments
Accession | Control type | Biosample summary | Lab | Status | Cart |
---|---|---|---|---|---|
ENCSR327XSO | control | Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for chr11:33064196-34664119 | Pardis Sabeti, Broad | released | |
ENCSR321OIB | control | Pardis Sabeti, Broad | released |