Summary for ENCSR157WAN
Summary
- Status
- released
- Description
- Functional characterization series for the gene target CD164.
- Donor diversity
- single
- Assay
- Flow-FISH CRISPR screen
- Biosample summary
- Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for chr6:108840570-109828820
- Diseases
- Not reported
- Treatments
- doxycycline
- Elements references
- ENCSR656JOT (GRCh38 chr6:108840570-109828820)
- Tiling modality
- full tiling
Attribution
ENCODE4 project
- Lab
- Pardis Sabeti, Broad
- Award
- UM1HG009435 (Pardis Sabeti, Broad)
- Project
- ENCODE
- Aliases
- pardis-sabeti:CD164_series_CD164
- External resources
- None submitted
Experiments in ENCSR157WAN
Experiments
2 experiments
Accession | Assay | Examined loci | Biosample summary | Lab | Status | Cart |
---|---|---|---|---|---|---|
ENCSR104CUH | Flow-FISH CRISPR screen | CD164 (90-100%) | Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for chr6:108840570-109828820 | Pardis Sabeti, Broad | released | |
ENCSR497BIB | Flow-FISH CRISPR screen | CD164 (0-10%) | Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for chr6:108840570-109828820 | Pardis Sabeti, Broad | released |
Control experiments
2 control experiments
Accession | Control type | Biosample summary | Lab | Status | Cart |
---|---|---|---|---|---|
ENCSR804HRD | control | Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for chr6:108840570-109828820 | Pardis Sabeti, Broad | released | |
ENCSR975HOY | control | Pardis Sabeti, Broad | released |