ENCODE
Home
Data
Functional Genomics data
Experiment search
Experiment matrix
ChIP-seq matrix
Human and mouse body maps
Functional genomics series
Single-cell experiments
Functional Characterization data
Experiment search
Experiment matrix
Cloud Resources
AWS Open Data
Azure Open Datasets
Collections
RNA-protein interactions (ENCORE)
Epigenomes from four individuals (ENTEx)
Rush Alzheimer’s disease study
Stem cell differentiation
Deeply profiled cell lines
Human donor matrix
Immune cells
Human reference epigenomes
Mouse reference epigenomes
Mouse development matrix
Protein knockdown (Degron)
Search by region
Publications
RNA-Get (gene expression)
Encyclopedia
About
Visualize (SCREEN)
Encyclopedia browser
Search
Methods
Materials & Methods
Antibodies
Genome references
Assays and standards
Glossary
File formats
Software tools
Pipelines
Data organization
Release policy
Schemas
Help
Using the portal
Cart
REST API
Citing ENCODE
FAQ
Project Overview
Collaborations
ENCODE workshops
About the DCC
Sign in / Create account
Listed carts
Search
Functional characterizations
Filter the functional characterizations included in the matrix:
Showing 598 results
List
Report
Download
{ ; }
Loading
Assay
Elements
Biosample
Analysis
Provenance
Quality
Other filters
Assay
Biosample
FACS CRISPR screen
CRISPRi
CRISPR screen
FACS CRISPR screen
Flow-FISH CRISPR screen
proliferation CRISPR screen
perturbation followed by scRNA-seq
perturbation followed by snATAC-seq
MPRA
STARR-seq
enhancer reporter assay
Homo sapiens
K562
1
1
53
23
2
3
23
7
HepG2
1
29
1
A549
1
8
17
SK-N-SH
14
WTC11
1
6
3
3
1
GM12878
1
1
9
glutamatergic neuron
6
1
2
HCT116
2
2
1
DNA cloning sample
1
3
HEK293T
4
HEL
4
pancreas
4
Jurkat
2
1
MCF-7
1
1
1
glial cell
3
BJAB
2
HEK293
2
THP-1
2
DU 145
1
HaCaT
1
HeLa
1
LNCAP
1
MDA-MB-231
1
NCI-H460
1
OCI-AML2
1
PC-3
1
SH-SY5Y
1
SK-MEL-28
1
SW620
1
mammary epithelial cell
1
neural progenitor cell
1
Mus musculus
whole organism
311
F123
13
MIN6
2
NIH3T3
2
Neuro-2a
2
activated CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
1
activated T-helper 17 cell
2
activated T-helper 1 cell
1
activated T-helper 2 cell
1
activated naive CD4-positive, alpha-beta T cell
1