Functional Characterization Experiment summary for ENCSR865UTQ
doi:10.17989/ENCSR865UTQ
Summary
- Status
- released
- Assay
- CRISPR screen (Control CRISPR screen)
- Control type
- control
- Biosample summary
- Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for chr5:87611207-89911174
- Biosample Type
- cell line
- Perturbation type
- CRISPRi
- Tiling modality
- full tiling
- Replication type
- isogenic
- Nucleic acid type
- DNA
- Platform
- Illumina NextSeq 500
- Elements references
- ENCSR328KHJ (GRCh38 chr5:87611207-89911174)
- Elements cloning
- ENCSR969JED
Attribution
ENCODE4 project
- Lab
- Pardis Sabeti, Broad
- Award
- UM1HG009435 (Pardis Sabeti, Broad)
- Project
- ENCODE
- Aliases
- pardis-sabeti:MEF2C_US_control_exp
- Date submitted
- May 9, 2020
- Date released
- May 20, 2021
- Functional Characterization Series
- ENCSR940PYU
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
---|---|---|---|---|---|
1 | 1 | Homo sapiens K562 cell line genetically modified (insertion) using transduction, genetically modified using CRISPRi (sgRNA) | ENCBS993SPL | ENCGM097HOE, ENCGM470LXQ | ENCLB275MRM |
2 | 1 | Homo sapiens K562 cell line genetically modified (insertion) using transduction, genetically modified using CRISPRi (sgRNA) | ENCBS074HXL | ENCGM097HOE, ENCGM470LXQ | ENCLB948JUX |