Functional Characterization Experiment summary for ENCSR560QIE
doi:10.17989/ENCSR560QIE
Summary
- Status
- released
- Assay
- MPRA
- Biosample summary
- Homo sapiens GM12878, 24 hours post-nucleic acid delivery time genetically modified (episome) using transient transfection
- Biosample Type
- cell line
- Replication type
- isogenic
- Nucleic acid type
- RNA
- Fragmentation methods
- none
- Strand specificity
- unstranded
- Platform
- Illumina NovaSeq 6000
- Elements references
- Elements mappings
Attribution
ENCODE4 project
- Lab
- Ryan Tewhey, JAX
- Award
- UM1HG009435 (Pardis Sabeti, Broad)
- Project
- ENCODE
- Aliases
- ryan-tewhey:mpra-OL33-ukbb-gm12878
- Date submitted
- November 24, 2021
- Date released
- February 12, 2023
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 3 | 1 | Homo sapiens GM12878 cell line genetically modified (episome) using transient transfection, 24 hours post-nucleic acid delivery time | ENCBS197OKI | ENCGM861EYW | ENCLB921ZBR |
| 2 | 1 | Homo sapiens GM12878 cell line genetically modified (episome) using transient transfection, 24 hours post-nucleic acid delivery time | ENCBS171ZBZ | ENCGM861EYW | ENCLB173XFW |
| 5 | 1 | Homo sapiens GM12878 cell line genetically modified (episome) using transient transfection, 24 hours post-nucleic acid delivery time | ENCBS841JKX | ENCGM861EYW | ENCLB708LEN |
| 4 | 1 | Homo sapiens GM12878 cell line genetically modified (episome) using transient transfection, 24 hours post-nucleic acid delivery time | ENCBS622KPZ | ENCGM861EYW | ENCLB724ELM |
| 1 | 1 | Homo sapiens GM12878 cell line genetically modified (episome) using transient transfection, 24 hours post-nucleic acid delivery time | ENCBS788FHJ | ENCGM861EYW | ENCLB978JSQ |