Functional Characterization Experiment summary for ENCSR466IBU
doi:10.17989/ENCSR466IBU
Summary
- Status
- released
- Assay
- CRISPR screen (Control CRISPR screen)
- Control type
- control
- Biosample summary
- Homo sapiens glutamatergic neuron genetically modified (insertion) using CRISPR (pgRNA) targeting H. sapiens FMR1, (insertion) using transduction for FMR1 locus
- Biosample Type
- in vitro differentiated cells
- Tiling modality
- full tiling
- Replication type
- isogenic
- Nucleic acid type
- DNA
- Platform
- Illumina NovaSeq 6000
- Elements references
Attribution
ENCODE4 project
- Lab
- Yin Shen, UCSF
- Award
- UM1HG009402 (Yin Shen, UCSF)
- Project
- ENCODE
- Aliases
- yin-shen:Not sorted EX control assay_FMR1
- Date released
- July 19, 2022
- Functional Characterization Series
- ENCSR884ZFA
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 2 | 2 | Homo sapiens male adult (30 years) glutamatergic neuron in vitro differentiated cells genetically modified (insertion) using CRISPR (pgRNA) targeting H. sapiens FMR1, genetically modified (insertion) using transduction | ENCBS592YLF | ENCGM200NOE, ENCGM923GKA | ENCLB253LZJ |
| 1 | 1 | Homo sapiens male adult (30 years) glutamatergic neuron in vitro differentiated cells genetically modified (insertion) using CRISPR (pgRNA) targeting H. sapiens FMR1, genetically modified (insertion) using transduction | ENCBS441ALJ | ENCGM200NOE, ENCGM923GKA | ENCLB833XWL |