Experiment summary for ENCSR968KAY
doi:10.17989/ENCSR968KAY
Summary
- Status
- released
- Assay
- HiC (in situ Hi-C)
- Biosample summary
- Homo sapiens GM12878
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- DpnII in situ GM12878 experiment
- Nucleic acid type
- DNA
- Library starting quantity
- 5000000cells [2-1]25000000cells [1-1]25000000cells [1-2]5000000cells [2-2]25000000cells [1-3]
- Size range
- 300-500
- Fragmentation methods
- chemical (DpnII restriction)
- Size selection method
- SPRI beads
- Platform
- Illumina HiSeq 2500
Attribution
ENCODE4 project
- Lab
- Erez Aiden, Baylor
- Award
- UM1HG009375 (Erez Aiden, Baylor)
- Project
- ENCODE
- External resources
- Aliases
- erez-aiden:gm12878-in-situ-dpnii
- Date submitted
- April 24, 2018
- Date released
- October 29, 2018
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 2 | 1 | Homo sapiens GM12878 cell line | ENCBS482WRI | ENCLB685OZR |
| 1 | 1 | Homo sapiens GM12878 cell line | ENCBS812YDO | ENCLB712HML |
| 1 | 2 | Homo sapiens GM12878 cell line | ENCBS812YDO | ENCLB818MLZ |
| 2 | 2 | Homo sapiens GM12878 cell line | ENCBS482WRI | ENCLB233KJR |
| 1 | 3 | Homo sapiens GM12878 cell line | ENCBS812YDO | ENCLB868QRM |