Experiment summary for ENCSR965XSS
doi:10.17989/ENCSR965XSS
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- CG9437
- Biosample summary
- Drosophila melanogaster strain CG9437-GFP whole organism embryo (0-16 hours) genetically modified (insertion) using site-specific recombination targeting D. melanogaster hng1
- Biosample Type
- whole organisms
- Replication type
- isogenic
- Description
- Input control for ChIP-seq on transgenic flies expressing CG9437-eGFP fusion proteins.
- Nucleic acid type
- DNA
- Size range
- 200-800
- Fragmentation methods
- sonication (Bioruptor generic)
- Size selection method
- SPRI beads
- Platform
- Illumina HiSeq 4000
- Controls
Attribution
modERN project
- Lab
- Kevin White, UChicago
- Award
- U41HG007355 (Robert Waterston, UW)
- Project
- modERN
- External resources
- Aliases
- kevin-white:CG9437-GFP
- Date submitted
- February 1, 2018
- Date released
- February 5, 2018
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
---|---|---|---|---|---|---|
1 | 1 | Drosophila melanogaster strain CG9437-GFP mixed sex embryo (0-16 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster hng1 | ENCBS435MBX | ENCGM930GUB | ENCAB728YTO | ENCLB580XER |
2 | 1 | Drosophila melanogaster strain CG9437-GFP mixed sex embryo (0-16 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster hng1 | ENCBS456ZXA | ENCGM930GUB | ENCAB728YTO | ENCLB937MCE |