Experiment summary for ENCSR912JNK
doi:10.17989/ENCSR912JNK
Summary
- Status
- archived
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- pqm-1
- Biosample summary
- Caenorhabditis elegans strain OP201 (unc-119(tm4063) III; wgIs201) whole organism L3 larva genetically modified (insertion) using bombardment targeting C. elegans pqm-1
- Biosample Type
- whole organisms
- Replication type
- isogenic
- Description
- ChIP-seq against PQM-1 in L3 larva worms.
- Nucleic acid type
- DNA
- Fragmentation methods
- sonication (generic microtip)
- Platform
- Illumina Genome Analyzer IIx
- Controls
Attribution
modENCODE Project
- Lab
- Michael Snyder, Stanford
- Award
- U01HG004267 (Michael Snyder, Stanford)
- Project
- modENCODE
- Aliases
- modencode:5
- Submitter comment
- This experiment is not able to be reprocessed. The experiment and any fastq files have been archived. Any downstream files have been deleted. There is no superseding experiment for this archived experiment.
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
|---|---|---|---|---|---|---|
| 5 | 1 | Caenorhabditis elegans strain OP201 (unc-119(tm4063) III; wgIs201) mixed sex L3 larva whole organism genetically modified (insertion) using bombardment targeting C. elegans pqm-1 | ENCBS674FLZ | ENCGM456SDH | ENCAB435FBQ | ENCLB022PTY |
| 3 | 1 | Caenorhabditis elegans strain OP201 (unc-119(tm4063) III; wgIs201) mixed sex L3 larva whole organism genetically modified (insertion) using bombardment targeting C. elegans pqm-1 | ENCBS698COK | ENCGM456SDH | ENCAB435FBQ | ENCLB743RKU |
| 5 | 2 | Caenorhabditis elegans strain OP201 (unc-119(tm4063) III; wgIs201) mixed sex L3 larva whole organism genetically modified (insertion) using bombardment targeting C. elegans pqm-1 | ENCBS674FLZ | ENCGM456SDH | ENCAB435FBQ | ENCLB872OOR |