Experiment summary for ENCSR900PXV

Summary

Status
released
Assay
ChIP-seq
Target
Control
Biosample summary
Caenorhabditis elegans strain OP752 (unc-119(tm4063); wgIs752 [somi-1::TY1::EGFP::3xFLAG + unc-119(+)]) whole organism young adult (65.5 hours) at L1 larva starved after bleaching stage genetically modified using bombardment
Biosample Type
whole organisms
Replication type
unreplicated
Description
This is the ChIP-seq control of transgenic worms expressing SOMI-1-eGFP fusion proteins.
Nucleic acid type
DNA
Size range
200-800
Fragmentation method
sonication (Bioruptor generic)
Size selection method
SPRI
Strand specificity
Non-strand-specific

Attribution

modERN project
Lab
Kevin White, UChicago
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
Aliases
valerie-reinke:SOMI-1_OP752_yAd_INPUT
Date submitted
September 17, 2018
Date released
September 19, 2018

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleModificationsLibrary
11strain OP752 (unc-119(tm4063); wgIs752 [somi-1::TY1::EGFP::3xFLAG + unc-119(+)]) mixed sex young adult (65.5 hours) at L1 larva starved after bleaching stage whole organism genetically modified (insertion) using bombardment targeting eGFP-somi-1ENCBS691DNKENCGM334SAAENCLB907WMZ