Experiment summary for ENCSR889IRT
doi:10.17989/ENCSR889IRT
Summary
- Status
- released
- Assay
- polyA plus RNA-seq
- Biosample summary
- Mus musculus strain B6.SJL-Ptprca Pepcb/BoyJ naive thymus-derived CD4-positive, alpha-beta T cell male adult (5 months) originated from whole organism
- Biosample Type
- primary cell
- Replication type
- unreplicated
- Nucleic acid type
- polyadenylated mRNA
- Size range
- 100-300
- Fragmentation methods
- shearing (Covaris generic)
- Strand specificity
- unstranded
- Platform
- Illumina HiSeq 2000
Attribution
Genomics of Gene Regulation Project
- Lab
- Christina Leslie, MSKCC
- Award
- U01HG007893 (Christina Leslie, MSKCC)
- Project
- GGR
- External resources
- Aliases
- christina-leslie:naive_effector_T_cells_rna_seq_ex3
- Date submitted
- August 31, 2016
- Date released
- March 7, 2017
- Treatment Time Series
- ENCSR969DEJ
- Differentiation Series
- ENCSR625MFN
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 2 | Mus musculus strain B6.SJL-Ptprca Pepcb/BoyJ male adult (5 months) naive thymus-derived CD4-positive, alpha-beta T primary cell originated from whole organism | ENCBS761GOT | ENCLB797DIP |
| 1 | 1 | Mus musculus strain B6.SJL-Ptprca Pepcb/BoyJ male adult (5 months) naive thymus-derived CD4-positive, alpha-beta T primary cell originated from whole organism | ENCBS761GOT | ENCLB677CBJ |
| 1 | 3 | Mus musculus strain B6.SJL-Ptprca Pepcb/BoyJ male adult (5 months) naive thymus-derived CD4-positive, alpha-beta T primary cell originated from whole organism | ENCBS761GOT | ENCLB550GZI |