Experiment summary for ENCSR867RTO

Summary

Status
released
Assay
RNA-seq (total RNA-seq)
Biosample summary
Mus musculus C57BL/6 dendritic cell originated from whole organism treated with 100 ng/mL lipopolysaccharide for 6 hours
Biosample Type
in vitro differentiated cells
Replication type
isogenic
Description
RNA-Seq
Treatments
100 ng/mL lipopolysaccharide (CHEBI:16412) for 6 hour
Nucleic acid type
RNA
Size range
175-500
Extraction method
RNeasy Plus Mini Kit Qiagen cat#74134 plus additional on column Dnase treatment
Strand specificity
Non-strand-specific

Attribution

Genomics of Gene Regulation Project
Lab
Manuel Garber, UMass
Award
U01HG007910 (Jeremy Luban, UMass)
Project
GGR
External resources
Aliases
manuel-garber:mDC-6h_LPS_RNA-seq
Date submitted
January 18, 2017
Date released
January 19, 2017

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleLibrary
21strain C57BL/6J dendritic in vitro differentiated cells originated from whole organism treated with 100 ng/mL lipopolysaccharide for 6 hoursENCBS139NUHENCLB373FTS
11strain C57BL/6J dendritic in vitro differentiated cells originated from whole organism treated with 100 ng/mL lipopolysaccharide for 6 hoursENCBS132PYZENCLB797VMN