Experiment summary for ENCSR809DRY
doi:10.17989/ENCSR809DRY
Summary
- Status
- released
- Assay
- ChIP-seq (Control ChIP-seq)
- Control type
- input library
- Biosample summary
- Caenorhabditis elegans strain OP682 (unc-119(tm4063); wgIs682 [Y5F2A.4::TY1::EGFP::3xFLAG + unc-119(+)]) whole organism L4 larva (48 hours) at L1 larva starved after bleaching stage genetically modified (insertion) using bombardment targeting C. elegans Y5F2A.4
- Biosample Type
- whole organisms
- Replication type
- isogenic
- Description
- This is the ChIP-seq control of transgenic worms expressing Y5F2A.4-eGFP fusion proteins.
- Nucleic acid type
- DNA
- Size range
- 200-800
- Fragmentation methods
- sonication (Bioruptor generic)
- Size selection method
- SPRI beads
- Platform
- Illumina HiSeq 4000
Attribution
modERN project
- Lab
- Kevin White, UChicago
- Award
- U41HG007355 (Robert Waterston, UW)
- Project
- modERN
- External resources
- Aliases
- kevin-white:Y5F2A.4_OP682_L4-INPUT
- Date submitted
- February 26, 2018
- Date released
- March 1, 2018
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 2 | 1 | Caenorhabditis elegans strain OP682 (unc-119(tm4063); wgIs682 [Y5F2A.4::TY1::EGFP::3xFLAG + unc-119(+)]) mixed sex L4 larva (48 hours) at L1 larva starved after bleaching stage whole organism genetically modified (insertion) using bombardment targeting C. elegans Y5F2A.4 | ENCBS005YTE | ENCGM205PHT | ENCLB364XYN |
| 1 | 1 | Caenorhabditis elegans strain OP682 (unc-119(tm4063); wgIs682 [Y5F2A.4::TY1::EGFP::3xFLAG + unc-119(+)]) mixed sex L4 larva (48 hours) at L1 larva starved after bleaching stage whole organism genetically modified (insertion) using bombardment targeting C. elegans Y5F2A.4 | ENCBS228HDZ | ENCGM205PHT | ENCLB116YQS |