Experiment summary for ENCSR799FDO
doi:10.17989/ENCSR799FDO
Summary
- Status
- released
- Assay
- ChIP-seq (Control ChIP-seq)
- Control type
- input library
- Biosample summary
- Caenorhabditis elegans strain OR3349 whole organism L4 larva 52 hours post synchronization at L1 larva starved after bleaching stage genetically modified (insertion) using bombardment targeting C. elegans hif-1
- Biosample Type
- whole organisms
- Replication type
- unreplicated
- Description
- This is the ChIP-seq control of transgenic worms expressing HIF-1-eGFP fusion proteins.
- Nucleic acid type
- DNA
- Fragmentation methods
- sonication (generic microtip)
- Size selection method
- SPRI beads
- Platform
- Illumina HiSeq 4000
Attribution
modERN project
- Lab
- Valerie Reinke, Yale
- Award
- U41HG007355 (Robert Waterston, UW)
- Project
- modERN
- External resources
- Aliases
- kevin-white:HIF-1-OR3349-L4-INPUT
- Date submitted
- October 5, 2017
- Date released
- November 22, 2017
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
---|---|---|---|---|---|
1 | 1 | Caenorhabditis elegans strain OR3349 mixed sex L4 larva 52 hours post synchronization at L1 larva starved after bleaching stage whole organism genetically modified (insertion) using bombardment targeting C. elegans hif-1 | ENCBS585IFK | ENCGM330VHI | ENCLB470IVE |