Experiment summary for ENCSR791IKU
doi:10.17989/ENCSR791IKU
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- ama-1
- Biosample summary
- Caenorhabditis elegans strain YL489 (unc-119(ed3) III; vrIs104 [pPIE-1::AMA-1:GFP:FLAG::PUF-5 3'UTR, unc-119 (+)]) whole organism young adult genetically modified (insertion) using bombardment targeting C. elegans ama-1
- Biosample Type
- whole organisms
- Replication type
- isogenic
- Description
- ChIP-seq against AMA-1 in YA worms.
- Nucleic acid type
- DNA
- Fragmentation methods
- sonication (generic microtip)
- Platform
- Illumina Genome Analyzer IIx
- Controls
Attribution
modENCODE Project
- Lab
- Michael Snyder, Stanford
- Award
- U01HG004267 (Michael Snyder, Stanford)
- Project
- modENCODE
- External resources
- Aliases
- modencode:AMA-1_YL489
- Date submitted
- January 9, 2018
- Date released
- January 22, 2018
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
|---|---|---|---|---|---|---|
| 1 | 1 | Caenorhabditis elegans strain YL489 (unc-119(ed3) III; vrIs104 [pPIE-1::AMA-1:GFP:FLAG::PUF-5 3'UTR, unc-119 (+)]) mixed sex young adult whole organism genetically modified (insertion) using bombardment targeting C. elegans ama-1 | ENCBS122EJJ | ENCGM592XRD | ENCAB435FBQ | ENCLB675YDR |
| 2 | 1 | Caenorhabditis elegans strain YL489 (unc-119(ed3) III; vrIs104 [pPIE-1::AMA-1:GFP:FLAG::PUF-5 3'UTR, unc-119 (+)]) mixed sex young adult whole organism genetically modified (insertion) using bombardment targeting C. elegans ama-1 | ENCBS355MYE | ENCGM592XRD | ENCAB435FBQ | ENCLB215ZZR |