Experiment summary for ENCSR733FVS

Summary

Status
released
Assay
ChIP-seq
Biosample summary
Caenorhabditis elegans strain YL503 (unc-119(ed3) III; vrIs110 [pPIE-1::AMA-1:GFP:FLAG::AMA-1 3'UTR, unc-119 (+)]) whole organism young adult genetically modified using bombardment
Biosample Type
whole organisms
Replication type
isogenic
Description
ChIP-seq against AMA-1 in YA worms.
Nucleic acid type
DNA
Fragmentation method
sonication (generic microtip)
Strand specificity
Non-strand-specific
Controls

Attribution

modENCODE Project
Lab
Michael Snyder, Stanford
Award
U01HG004267 (Michael Snyder, Stanford)
Project
modENCODE
Aliases
modencode:AMA-1_YL503
Date submitted
January 9, 2018
Date released
February 15, 2018

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleModificationsAntibodyLibrary
11strain YL503 (unc-119(ed3) III; vrIs110 [pPIE-1::AMA-1:GFP:FLAG::AMA-1 3'UTR, unc-119 (+)]) mixed sex young adult whole organism genetically modified (insertion) using bombardment targeting eGFP-ama-1ENCBS513JTPENCGM706TXHENCAB435FBQENCLB831ERO
21strain YL503 (unc-119(ed3) III; vrIs110 [pPIE-1::AMA-1:GFP:FLAG::AMA-1 3'UTR, unc-119 (+)]) mixed sex young adult whole organism genetically modified (insertion) using bombardment targeting eGFP-ama-1ENCBS386SRVENCGM706TXHENCAB435FBQENCLB326WSK