Experiment summary for ENCSR731LTP
Summary
- Status
- revoked
- Assay
- ChIP-seq (Control ChIP-seq)
- Control type
- input library
- Biosample summary
- Caenorhabditis elegans strain OP494 (unc-119(tm4063) III; wgIs494) whole organism hermaphrodite late embryo 5 hours post synchronization using egg bleaching genetically modified (insertion) using bombardment targeting C. elegans ztf-16
- Biosample Type
- whole organisms
- Replication type
- unreplicated
- Description
- This is the ChIP-seq control of transgenic worms expressing ZTF-16-eGFP fusion proteins.
- Nucleic acid type
- DNA
- Fragmentation methods
- sonication (generic microtip)
- Size selection method
- SPRI beads
Attribution
modERN project
- Lab
- Valerie Reinke, Yale
- Award
- U41HG007355 (Robert Waterston, UW)
- Project
- modERN
- Aliases
- kevin-white:ZTF-16-OP494-LE-INPUT
- Date released
- May 24, 2016
- Submitter comment
- The submitting lab requested to revoke the data associated with strain OP494 because genotyping revealed that strain contains both tagged ztf-16 and lag-1.
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
---|---|---|---|---|---|
1 | 1 | Caenorhabditis elegans strain OP494 (unc-119(tm4063) III; wgIs494) hermaphrodite late embryo 5 hours post synchronization using egg bleaching whole organism genetically modified (insertion) using bombardment targeting C. elegans ztf-16 | ENCBS214JPC | ENCGM642POY | ENCLB078BOH |