Experiment summary for ENCSR713MAY
doi:10.17989/ENCSR713MAY
Summary
- Status
- released
- Assay
- ChIP-seq (Control ChIP-seq)
- Control type
- input library
- Biosample summary
- Caenorhabditis elegans strain OP541 (unc-119(tm4063) III; wgIs541) whole organism hermaphrodite midembryo 3 hours post synchronization using egg bleaching genetically modified (insertion) using bombardment targeting C. elegans cog-1
- Biosample Type
- whole organisms
- Replication type
- unreplicated
- Description
- This is the ChIP-seq control of transgenic worms expressing COG-1-eGFP fusion proteins.
- Nucleic acid type
- DNA
- Fragmentation methods
- sonication (generic microtip)
- Size selection method
- SPRI beads
- Platform
- Illumina HiSeq 2500
Attribution
modERN project
- Lab
- Valerie Reinke, Yale
- Award
- U41HG007355 (Robert Waterston, UW)
- Project
- modERN
- External resources
- Aliases
- kevin-white:COG-1-OP541-ME-INPUT
- Date submitted
- August 24, 2015
- Date released
- May 10, 2016
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 1 | 1 | Caenorhabditis elegans strain OP541 (unc-119(tm4063) III; wgIs541) hermaphrodite midembryo 3 hours post synchronization using egg bleaching whole organism genetically modified (insertion) using bombardment targeting C. elegans cog-1 | ENCBS342FBW | ENCGM800VTU | ENCLB292FNP |