Experiment summary for ENCSR711AVS
doi:10.17989/ENCSR711AVS
Summary
- Status
- released
- Assay
- HiC (in situ Hi-C)
- Biosample summary
- Homo sapiens mammary epithelial cell
- Biosample Type
- primary cell
- Replication type
- isogenic
- Description
- HMEC in situ Hi-C experiment
- Nucleic acid type
- DNA
- Library starting quantity
- 2200000cells [2-1]2200000cells [2-2]2200000cells [1-5]2200000cells [2-4]4400000cells [1-1]2200000cells [1-4]2200000cells [1-2]2200000cells [1-3]2200000cells [2-3]
- Size range
- 300-500
- Fragmentation methods
- chemical (MboI restriction)
- Size selection method
- SPRI beads
- Platform
- Illumina HiSeq X Ten
Attribution
ENCODE4 project
- Lab
- Erez Aiden, Baylor
- Award
- UM1HG009375 (Erez Aiden, Baylor)
- Project
- ENCODE
- Aliases
- erez-aiden:HG1-experiment-HMEC-insitu
- Date submitted
- January 30, 2019
- Date released
- March 2, 2019
- Aggregate Series
- ENCSR630JSF
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 2 | 1 | Homo sapiens mammary epithelial primary cell | ENCBS544EML | ENCLB127KEY |
| 2 | 2 | Homo sapiens mammary epithelial primary cell | ENCBS544EML | ENCLB484SHZ |
| 1 | 5 | Homo sapiens mammary epithelial primary cell | ENCBS240JYJ | ENCLB179MJQ |
| 2 | 4 | Homo sapiens mammary epithelial primary cell | ENCBS544EML | ENCLB145ZQA |
| 1 | 1 | Homo sapiens mammary epithelial primary cell | ENCBS240JYJ | ENCLB595GBQ |
| 1 | 4 | Homo sapiens mammary epithelial primary cell | ENCBS240JYJ | ENCLB471ZJE |
| 1 | 2 | Homo sapiens mammary epithelial primary cell | ENCBS240JYJ | ENCLB299WVA |
| 1 | 3 | Homo sapiens mammary epithelial primary cell | ENCBS240JYJ | ENCLB245IWM |
| 2 | 3 | Homo sapiens mammary epithelial primary cell | ENCBS544EML | ENCLB224JBR |