Experiment summary for ENCSR684GHA

doi:10.17989/ENCSR684GHA

Summary

Status
released
Assay
ChIP-seq (Control ChIP-seq)
Control type
input library
Biosample summary
Homo sapiens SK-N-SH genetically modified (insertion) using CRISPR targeting H. sapiens TOX2 treated with 6 μM all-trans-retinoic acid for 48 hours
Biosample Type
cell line
Replication type
unreplicated
Description
SK-N-SH immortalized cell line (treated with 6 μM all-trans-retinoic acid for 48 hours) stably expressing C-terminal eGFP-TOX2 fusion protein.
Treatments
6 μM all-trans-retinoic acid (CHEBI:15367) for 48 hours
Nucleic acid type
DNA
Size range
450-650

Attribution

ENCODE4 project
Lab
Michael Snyder, Stanford
Award
UM1HG009442 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Aliases
michael-snyder:SK-N-SH_RA_eGFP-TOX2_CRISPR_ChIP_input
Date submitted
January 13, 2018
Date released
August 3, 2020

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Library
11Homo sapiens SK-N-SH cell line genetically modified (insertion) using CRISPR targeting H. sapiens TOX2 treated with 6 μM all-trans-retinoic acid for 48 hoursENCBS805KSWENCGM485KZTENCLB563XZP