Experiment summary for ENCSR549PVK

doi:10.17989/ENCSR549PVK

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
PATZ1
Biosample summary
Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens PATZ1
Biosample Type
cell line
Replication type
isogenic
Description
eGFP-PATZ1 ChIP-seq on human K562
Nucleic acid type
DNA
Size range
250-450
Fragmentation methods
sonication (Bioruptor Pico)

Attribution

ENCODE4 project
Lab
Michael Snyder, Stanford
Award
UM1HG009442 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Aliases
michael-snyder:pCS-261, michael-snyder:pCS-eGFP-PATZ1-K562 Chip
Date submitted
May 18, 2020
Date released
October 7, 2020
Annotation (gkmsvm-model)
Tags
Search for all Experiment with internal tag RegulomeDB_2_2Search for all Experiment with internal tag RegulomeDB_2_1

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
11Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting H. sapiens PATZ1ENCBS196FSVENCGM453UHRENCAB728YTOENCLB436HOE
21Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting H. sapiens PATZ1ENCBS774MUHENCGM453UHRENCAB728YTOENCLB713TFW