Experiment summary for ENCSR513JKI
doi:10.17989/ENCSR513JKI
Summary
- Status
- released
- Assay
- RNA-seq (total RNA-seq)
- Biosample summary
- Trichechus manatus peripheral blood mononuclear cell
- Biosample Type
- primary cell
- Replication type
- anisogenic
- Description
- Short-read RNA-Seq experiment of blood sample from 9 manatees.
- Nucleic acid type
- RNA
- RNA integrity number
- 8.4 [1-1]8.2 [2-1]8.2 [3-1]8.8 [4-1]8.5 [5-1]8 [6-1]8.2 [7-1]8.4 [8-1]8.4 [9-1]
- Size range
- 300-350
- Strand specificity
- Strand-specific (reverse)
- Platform
- Illumina HiSeq 4000
Attribution
Community submission
- Lab
- Ana Conesa, UF
- Project
- community
- Aliases
- ali-mortazavi:manatee_rnaseq
- Date submitted
- April 29, 2021
- Date released
- May 4, 2021
- ENCLB910KMU submitter comment
- WARNING: Innefficient rRNA depletion
- ENCLB577KCO submitter comment
- WARNING: Innefficient rRNA depletion
- ENCLB007OFX submitter comment
- WARNING: Innefficient rRNA depletion
- ENCLB015IFP submitter comment
- WARNING: Innefficient rRNA depletion
- ENCLB771CBD submitter comment
- WARNING: Innefficient rRNA depletion
- ENCLB497KDE submitter comment
- WARNING: Innefficient rRNA depletion
- ENCLB257ZHR submitter comment
- WARNING: Innefficient rRNA depletion
- ENCLB267FZL submitter comment
- WARNING: Innefficient rRNA depletion
- ENCLB324PGJ submitter comment
- WARNING: Innefficient rRNA depletion
- Tags
Anisogenic replicates
Anisogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Trichechus manatus peripheral blood mononuclear primary cell | ENCBS538IUC | ENCLB910KMU |
| 2 | 1 | Trichechus manatus peripheral blood mononuclear primary cell | ENCBS797CKD | ENCLB577KCO |
| 3 | 1 | Trichechus manatus peripheral blood mononuclear primary cell | ENCBS193IGY | ENCLB007OFX |
| 4 | 1 | Trichechus manatus peripheral blood mononuclear primary cell | ENCBS621PNS | ENCLB015IFP |
| 5 | 1 | Trichechus manatus peripheral blood mononuclear primary cell | ENCBS416GXR | ENCLB771CBD |
| 6 | 1 | Trichechus manatus peripheral blood mononuclear primary cell | ENCBS689ZOI | ENCLB497KDE |
| 7 | 1 | Trichechus manatus peripheral blood mononuclear primary cell | ENCBS235LIE | ENCLB257ZHR |
| 8 | 1 | Trichechus manatus peripheral blood mononuclear primary cell | ENCBS014III | ENCLB267FZL |
| 9 | 1 | Trichechus manatus peripheral blood mononuclear primary cell | ENCBS169YJA | ENCLB324PGJ |