Experiment summary for ENCSR510LKT
doi:10.17989/ENCSR510LKT
Summary
- Status
- released
- Assay
- ChIP-seq (Control ChIP-seq)
- Control type
- input library
- Biosample summary
- Caenorhabditis elegans strain OP102 (unc-119(tm4063) III; wgIs102) whole organism L4 larva genetically modified (insertion) using bombardment targeting C. elegans mep-1
- Biosample Type
- whole organisms
- Replication type
- isogenic
- Description
- Input ChIP-seq in L4 larva worms.
- Nucleic acid type
- DNA
- Size range
- 150-350
- Fragmentation methods
- sonication (generic microtip)
- Platform
- Illumina Genome Analyzer IIx
Attribution
modENCODE Project
- Lab
- Michael Snyder, Stanford
- Award
- U01HG004267 (Michael Snyder, Stanford)
- Project
- modENCODE
- External resources
- Aliases
- modencode:3842_input
- Date submitted
- March 31, 2014
- Date released
- March 31, 2014
- Submitter comment
- IMPORTANT! Strain OP102 was mistakenly labelled as having an eGFP tag to ham-1 instead of mep-1. This error was fixed on Feb 5, 2018.
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 1 | 1 | Caenorhabditis elegans strain OP102 (unc-119(tm4063) III; wgIs102) mixed sex L4 larva whole organism genetically modified (insertion) using bombardment targeting C. elegans mep-1 | ENCBS560BPO | ENCGM322GIV | ENCLB483PNA |
| 2 | 1 | Caenorhabditis elegans strain OP102 (unc-119(tm4063) III; wgIs102) mixed sex L4 larva whole organism genetically modified (insertion) using bombardment targeting C. elegans mep-1 | ENCBS072JPP | ENCGM322GIV | ENCLB891YJG |
| 3 | 1 | Caenorhabditis elegans strain OP102 (unc-119(tm4063) III; wgIs102) mixed sex L4 larva whole organism genetically modified (insertion) using bombardment targeting C. elegans mep-1 | ENCBS256XSJ | ENCGM322GIV | ENCLB624IQP |