Experiment summary for ENCSR475ZYS
doi:10.17989/ENCSR475ZYS
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- ets-7
- Biosample summary
- Caenorhabditis elegans strain OP487 whole organism hermaphrodite early embryo 3 hours post synchronization using egg bleaching genetically modified (insertion) using bombardment targeting C. elegans ets-7
- Biosample Type
- whole organisms
- Replication type
- isogenic
- Description
- ChIP-seq of transgenic worms expressing ETS-7-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
- Nucleic acid type
- DNA
- Fragmentation methods
- sonication (generic microtip)
- Size selection method
- SPRI beads
- Platform
- Illumina HiSeq 2500
- Controls
Attribution
modERN project
- Lab
- Valerie Reinke, Yale
- Award
- U41HG007355 (Robert Waterston, UW)
- Project
- modERN
- External resources
- Aliases
- kevin-white:ETS-7-OP487-EE
- Date submitted
- July 29, 2015
- Date released
- May 24, 2016
- Submitter comment
- ENCFF681HRD, ENCFF510ESL, ENCFF376NWL, ENCFF596DEZ were revoked because a software bug accidentally truncated the file content. The submitters will provide replacement files.
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
|---|---|---|---|---|---|---|
| 3 | 1 | Caenorhabditis elegans strain OP487 hermaphrodite early embryo 3 hours post synchronization using egg bleaching whole organism genetically modified (insertion) using bombardment targeting C. elegans ets-7 | ENCBS439WPQ | ENCGM601WSV | ENCAB728YTO | ENCLB705BBI |
| 4 | 1 | Caenorhabditis elegans strain OP487 hermaphrodite early embryo 3 hours post synchronization using egg bleaching whole organism genetically modified (insertion) using bombardment targeting C. elegans ets-7 | ENCBS862TNR | ENCGM601WSV | ENCAB728YTO | ENCLB318QCV |