Experiment summary for ENCSR445QRF
doi:10.17989/ENCSR445QRF
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- HNF4A
- Biosample summary
- Homo sapiens liver tissue female child (4 years)
- Biosample Type
- tissue
- Replication type
- isogenic
- Description
- Chip-Seq on HNF4A-human
- Nucleic acid type
- DNA
- Fragmentation methods
- see document
- Platform
- Illumina HiSeq 2000
- Controls
Attribution
ENCODE3 project
- Lab
- Richard Myers, HAIB
- Award
- U54HG006998 (Richard Myers, HAIB)
- Project
- ENCODE
- External resources
- Aliases
- richard-myers:SL85872-SL89745
- Date submitted
- September 30, 2015
- Date released
- June 30, 2016
- Annotation (gkmsvm-model)
- Annotation (BPNet-model)
- Submitter comment
- This experiment is being used in the ENCODE-DREAM Transcription Factor Binding Site Prediction Challenge (https://www.synapse.org/#!Synapse:syn6131484/wiki/400026). The files will be unavailable until after the challenge completes on 09-30-16. UPDATE: There will be a second round to the challenge that is expected to end on 01-11-2017
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
---|---|---|---|---|---|
1 | 1 | Homo sapiens female child (4 years) liver tissue | ENCBS401URL | ENCAB000AHP | ENCLB105DUQ |
2 | 1 | Homo sapiens female child (4 years) liver tissue | ENCBS401URL | ENCAB000AHP | ENCLB074WPQ |