Experiment summary for ENCSR442XYW

doi:10.17989/ENCSR442XYW

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
madf-2
Biosample summary
Caenorhabditis elegans strain OP587 (unc-119(tm4063) III; wgIs587) whole organism late embryo 3 hours post synchronization using egg bleaching genetically modified (insertion) using bombardment targeting C. elegans madf-2
Biosample Type
whole organisms
Replication type
isogenic
Description
ChIP-seq of transgenic worms expressing MADF-2-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
Nucleic acid type
DNA
Fragmentation methods
sonication (generic microtip)
Size selection method
SPRI beads
Controls

Attribution

modERN project
Lab
Valerie Reinke, Yale
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
External resources
Aliases
kevin-white:MADF-2-OP587-LE
Date submitted
October 5, 2017
Date released
November 6, 2017

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
21Caenorhabditis elegans strain OP587 (unc-119(tm4063) III; wgIs587) mixed sex late embryo 3 hours post synchronization using egg bleaching whole organism genetically modified (insertion) using bombardment targeting C. elegans madf-2ENCBS655ZDXENCGM890CXIENCAB728YTOENCLB917VJO
11Caenorhabditis elegans strain OP587 (unc-119(tm4063) III; wgIs587) mixed sex late embryo 3 hours post synchronization using egg bleaching whole organism genetically modified (insertion) using bombardment targeting C. elegans madf-2ENCBS233BWEENCGM890CXIENCAB728YTOENCLB074CMY