Experiment summary for ENCSR439WAF

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
E4F1
Biosample summary
Homo sapiens GM12878
Biosample Type
cell line
Replication type
isogenic
Description
E4F1 ChIP-seq on human GM12878
Nucleic acid type
DNA
Size range
450-650
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE3 project
Lab
Michael Snyder, Stanford
Award
U54HG006996 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Aliases
michael-snyder:ChIPss-484
Date submitted
April 29, 2016
Date released
January 26, 2018
Submitter comment
IMPORTANT: This experiment is currently under investigation for possible sample contamination, please use with caution if you must. We note that this ChIP-seq experiment was performed using an antibody for which we have provided a compliant primary characterization but no secondary characterization. A secondary characterization using IP-MS was attempted, but the experiment failed. There is no remaining antibody from this lot number and therefore additional secondary characterizations cannot be attempted. However, because the replicate ChIP-seq datasets passed the ENCODE IDR ChIP-seq data quality standards, we are releasing the data to the public.
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv5

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
21GM12878 cell lineENCBS339VHOENCAB944PGRENCLB720WTE
11GM12878 cell lineENCBS276RPGENCAB944PGRENCLB587UUM