Experiment summary for ENCSR377UPT
doi:10.17989/ENCSR377UPT
Summary
- Status
- released
- Assay
- RNA-seq (total RNA-seq)
- Biosample summary
- Mus musculus strain B6CASTF1/J T-cell male adult (66.00 days)
- Biosample Type
- primary cell
- Replication type
- isogenic
- Description
- MouseF1 of C57BL/6 (f) x CAST Eij (m)_m.CD3_spleen_M_66days
- Nucleic acid type
- RNA
- RNA integrity number
- 9 [2-1]9 [3-1]8 [4-1]9 [1-1]
- Library starting quantity
- 300ng
- Average fragment size
- 271 [2-1]264 [3-1]272 [4-1]264 [1-1]
- Strand specificity
- Strand-specific (reverse)
- Spike-ins datasets
- ENCSR597UQL
- Platform
- Illumina HiSeq 2500
Attribution
ENCODE4 project
- Lab
- Barbara Wold, Caltech
- Award
- UM1HG009443 (Barbara Wold, Caltech)
- Project
- ENCODE
- Aliases
- barbara-wold:MouseF1_of_C57BL6_(f)_x_CAST_Eij_(m)_m.CD3_spleen_M_66days
- Date released
- January 20, 2023
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 2 | 1 | Mus musculus strain B6CASTF1/J male adult (66.00 days) T-cell primary cell | ENCBS380IYP | ENCLB382IQB |
| 3 | 1 | Mus musculus strain B6CASTF1/J male adult (66.00 days) T-cell primary cell | ENCBS742VKS | ENCLB732XBI |
| 4 | 1 | Mus musculus strain B6CASTF1/J male adult (66.00 days) T-cell primary cell | ENCBS460IRW | ENCLB182FNT |
| 1 | 1 | Mus musculus strain B6CASTF1/J male adult (66.00 days) T-cell primary cell | ENCBS598TMX | ENCLB364ZDD |