Experiment summary for ENCSR374GSQ
doi:10.17989/ENCSR374GSQ
Summary
- Status
- released
- Assay
- RNA-seq (total RNA-seq)
- Target
- fkh-10
- Biosample summary
- Caenorhabditis elegans strain RB884 (fkh-10(ok733) I) whole organism hermaphrodite 80 minutes post synchronization using egg bleaching genetically modified (mutagenesis) using mutagen treatment targeting C. elegans fkh-10
- Biosample Type
- whole organisms
- Replication type
- unreplicated
- Nucleic acid type
- RNA
- Depleted in
- rRNA
- Size range
- 350-600
- Extraction method
- Trizol
- Fragmentation methods
- shearing (Covaris generic)
- Strand specificity
- unstranded
- Platform
- Illumina HiSeq 2500, Illumina NextSeq 500
Attribution
modERN project
- Lab
- Robert Waterston, UW
- Award
- U41HG007355 (Robert Waterston, UW)
- Project
- modERN
- Aliases
- robert-waterston:experiment_RB884_80_1
- Date submitted
- October 16, 2015
- Date released
- March 22, 2019
- Organism Development Series
- ENCSR220XWB
- Submitter comment
- Analysis of this data is in progress
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 1 | 1 | Caenorhabditis elegans strain RB884 (fkh-10(ok733) I) hermaphrodite 80 minutes post synchronization using egg bleaching whole organism genetically modified (mutagenesis) using mutagen treatment targeting C. elegans fkh-10 | ENCBS757XTA | ENCGM918XQD | ENCLB857STI |