Experiment summary for ENCSR334GBD
doi:10.17989/ENCSR334GBD
Summary
- Status
- released
- Assay
- whole-genome shotgun bisulfite sequencing (WGBS)
- Biosample summary
- Mus musculus strain B6NCrl liver tissue embryo (12.5 days)
- Biosample Type
- tissue
- Replication type
- isogenic
- Description
- Whole genome bisulfite-seq on embryonic 12.5 day mouse liver
- Nucleic acid type
- DNA
- Size range
- 180-500
- Lysis method
- QIAGEN DNeasy Blood & Tissue Kit
- Fragmentation methods
- shearing (Covaris S2)
- Size selection method
- Sera-mag SpeedBeads
- Platform
- Illumina HiSeq 2500
Attribution
ENCODE3 project
- Lab
- Joe Ecker, Salk
- Award
- U54HG006997 (Bing Ren, UCSD)
- Project
- ENCODE
- External resources
- Aliases
- joe-ecker:E12_5_LV
- Date submitted
- March 11, 2016
- Date released
- March 14, 2016
- Reference Epigenome
- ENCSR192PSV
- Organism Development Series
- ENCSR011MFZ
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 2 | Mus musculus strain B6NCrl mixed sex embryo (12.5 days) liver tissue | ENCBS236ISK | ENCLB657WHQ |
| 2 | 1 | Mus musculus strain B6NCrl mixed sex embryo (12.5 days) liver tissue | ENCBS479VPX | ENCLB340LHO |
| 2 | 2 | Mus musculus strain B6NCrl mixed sex embryo (12.5 days) liver tissue | ENCBS479VPX | ENCLB675RRB |
| 1 | 1 | Mus musculus strain B6NCrl mixed sex embryo (12.5 days) liver tissue | ENCBS236ISK | ENCLB852JKZ |