Experiment summary for ENCSR318RVX
doi:10.17989/ENCSR318RVX
Summary
- Status
- released
- Assay
- ChIP-seq (Control ChIP-seq)
- Control type
- input library
- Biosample summary
- Caenorhabditis elegans strain OP656 (unc-119 (tm4063) III; wgIs656) whole organism early embryo 45 minutes post synchronization using egg bleaching genetically modified (insertion) using bombardment targeting C. elegans hmbx-1
- Biosample Type
- whole organisms
- Replication type
- unreplicated
- Description
- This is the ChIP-seq control of transgenic worms expressing HMBX-1-eGFP fusion proteins.
- Nucleic acid type
- DNA
- Fragmentation methods
- sonication (generic microtip)
- Size selection method
- SPRI beads
- Platform
- Illumina HiSeq 4000
Attribution
modERN project
- Lab
- Valerie Reinke, Yale
- Award
- U41HG007355 (Robert Waterston, UW)
- Project
- modERN
- External resources
- Aliases
- kevin-white:HMBX-1-OP656-EE-INPUT
- Date submitted
- October 4, 2016
- Date released
- October 27, 2016
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
---|---|---|---|---|---|
1 | 1 | Caenorhabditis elegans strain OP656 (unc-119 (tm4063) III; wgIs656) mixed sex early embryo 45 minutes post synchronization using egg bleaching whole organism genetically modified (insertion) using bombardment targeting C. elegans hmbx-1 | ENCBS335RPL | ENCGM212KJV | ENCLB264HOL |