Experiment summary for ENCSR304RDL
doi:10.17989/ENCSR304RDL
Summary
- Status
- released
- Assay
- polyA plus RNA-seq
- Biosample summary
- Mus musculus strain B6NCrl forebrain tissue embryo (10.5 days)
- Biosample Type
- tissue
- Replication type
- isogenic
- Description
- PolyA RNA-Seq from oligo-dT primed Total RNA on 10ng of embryonic 10.5 day mouse forebrain
- Nucleic acid type
- polyadenylated mRNA
- RNA integrity number
- 10
- Library starting quantity
- 10ng
- Size range
- >200
- Extraction method
- Ambion mirVana
- Fragmentation methods
- chemical (Nextera tagmentation)
- Size selection method
- SPRI beads
- Strand specificity
- unstranded
- Spike-ins datasets
- ENCSR884LPM
- Platform
- Illumina HiSeq 2500
Attribution
ENCODE3 project
- Lab
- Barbara Wold, Caltech
- Award
- U54HG006998 (Richard Myers, HAIB)
- Project
- ENCODE
- External resources
- References
- Date submitted
- July 29, 2016
- Date released
- August 11, 2016
- Reference Epigenome
- ENCSR228WLP
- Organism Development Series
- ENCSR443OEA
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
---|---|---|---|---|
1 | 1 | Mus musculus strain B6NCrl mixed sex embryo (10.5 days) forebrain tissue | ENCBS152ONW | ENCLB029BTN |
2 | 1 | Mus musculus strain B6NCrl mixed sex embryo (10.5 days) forebrain tissue | ENCBS790BBA | ENCLB286HEN |