Experiment summary for ENCSR298WSI
doi:10.17989/ENCSR298WSI
Summary
- Status
- released
- Assay
- HiC (in situ Hi-C)
- Biosample summary
- Mus musculus strain 129/Ola mouse embryonic stem cell
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- in situ MboI Hi-C
- Nucleic acid type
- DNA
- Library starting quantity
- 3300000cells [2-1]3300000cells [2-4]5000000cells [1-1]3300000cells [2-5]3300000cells [2-6]3300000cells [2-2]3300000cells [2-3]2500000cells [3-1]2500000cells [3-3]2500000cells [3-5]2500000cells [3-4]2500000cells [3-2]2500000cells [3-6]
- Size range
- 300-500
- Fragmentation methods
- chemical (MboI restriction)
- Size selection method
- SPRI beads
- Platform
- Illumina HiSeq 2500
Attribution
ENCODE4 project
- Lab
- Erez Aiden, Baylor
- Award
- UM1HG009375 (Erez Aiden, Baylor)
- Project
- ENCODE
- External resources
- Aliases
- erez-aiden:mouse-ES_ES-E14TG2a-WT
- Date submitted
- October 31, 2018
- Date released
- January 28, 2019
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 2 | 1 | Mus musculus strain 129/Ola mouse embryonic stem cell line | ENCBS841DCQ | ENCLB780HUW |
| 2 | 4 | Mus musculus strain 129/Ola mouse embryonic stem cell line | ENCBS841DCQ | ENCLB788DYI |
| 1 | 1 | Mus musculus strain 129/Ola mouse embryonic stem cell line | ENCBS917UCO | ENCLB193GPE |
| 2 | 5 | Mus musculus strain 129/Ola mouse embryonic stem cell line | ENCBS841DCQ | ENCLB509FEX |
| 2 | 6 | Mus musculus strain 129/Ola mouse embryonic stem cell line | ENCBS841DCQ | ENCLB846CZL |
| 2 | 2 | Mus musculus strain 129/Ola mouse embryonic stem cell line | ENCBS841DCQ | ENCLB767VHZ |
| 2 | 3 | Mus musculus strain 129/Ola mouse embryonic stem cell line | ENCBS841DCQ | ENCLB272BMQ |
| 3 | 1 | Mus musculus strain 129/Ola mouse embryonic stem cell line | ENCBS340HTQ | ENCLB873IOY |
| 3 | 3 | Mus musculus strain 129/Ola mouse embryonic stem cell line | ENCBS340HTQ | ENCLB452SOJ |
| 3 | 5 | Mus musculus strain 129/Ola mouse embryonic stem cell line | ENCBS340HTQ | ENCLB478QRG |
| 3 | 4 | Mus musculus strain 129/Ola mouse embryonic stem cell line | ENCBS340HTQ | ENCLB471UVZ |
| 3 | 2 | Mus musculus strain 129/Ola mouse embryonic stem cell line | ENCBS340HTQ | ENCLB500YJR |
| 3 | 6 | Mus musculus strain 129/Ola mouse embryonic stem cell line | ENCBS340HTQ | ENCLB649LMU |