Experiment summary for ENCSR280XEB
doi:10.17989/ENCSR280XEB
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- Hr78
- Biosample summary
- Drosophila melanogaster strain Hr78-GFP whole organism embryo (8-16 hours) stably expressing Hr78
- Biosample Type
- whole organisms
- Replication type
- isogenic
- Description
- ChIP-seq on transgenic flies expressing -eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
- Nucleic acid type
- DNA
- Size range
- 200-800
- Fragmentation methods
- sonication (Bioruptor generic)
- Size selection method
- SPRI beads
- Platform
- Illumina HiSeq 4000
- Controls
Attribution
modERN project
- Lab
- Kevin White, UChicago
- Award
- U41HG007355 (Robert Waterston, UW)
- Project
- modERN
- External resources
- Aliases
- kevin-white:Hr78-GFP
- Date submitted
- April 12, 2019
- Date released
- May 16, 2019
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
|---|---|---|---|---|---|---|
| 1 | 1 | Drosophila melanogaster strain Hr78-GFP mixed sex embryo (8-16 hours) whole organism stably expressing C-terminal eGFP-tagged Hr78 | ENCBS292SST | ENCGM419CXT | ENCAB728YTO | ENCLB354CZW |
| 3 | 1 | Drosophila melanogaster strain Hr78-GFP mixed sex embryo (8-16 hours) whole organism stably expressing C-terminal eGFP-tagged Hr78 | ENCBS919YBY | ENCGM419CXT | ENCAB728YTO | ENCLB621VEH |