Experiment summary for ENCSR239ZQA
doi:10.17989/ENCSR239ZQA
Summary
- Status
- released
- Assay
- RAMPAGE
- Biosample summary
- Homo sapiens NCI-H460 nuclear fraction
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- The libraries contained in this experiment come from nuclear fractions of immortalized cell line NCI-H460 derived from a large cell lung carcinoma of a 37 year old male. They are stranded PE101 Illumina Hi-Seq RAMPAGE libraries from rRNA-depleted Total RNA > 200 nucleotides in size.
- Nucleic acid type
- RNA
- Depleted in
- rRNA
- Size range
- >200
- Fragmentation methods
- see document
- Strand specificity
- Strand-specific (forward)
- Platform
- Illumina HiSeq 2000
- Controls
Attribution
ENCODE3 project
- Lab
- Thomas Gingeras, CSHL
- Award
- U54HG007004 (Thomas Gingeras, CSHL)
- Project
- ENCODE
- External resources
- References
- Date submitted
- April 2, 2015
- Date released
- April 14, 2015
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 2 | 1 | Homo sapiens NCI-H460 cell line nuclear fraction | ENCBS641PGO | ENCLB596DKM |
| 1 | 1 | Homo sapiens NCI-H460 cell line nuclear fraction | ENCBS446PPO | ENCLB263PKG |