Experiment summary for ENCSR202OWR
doi:10.17989/ENCSR202OWR
Summary
- Status
- released
- Assay
- RNA-seq (total RNA-seq)
- Biosample summary
- Homo sapiens colonic mucosa tissue female adult (41 years)
- Biosample Type
- tissue
- Replication type
- unreplicated
- Description
- w61_colon_mucosa
- Nucleic acid type
- RNA
- RNA integrity number
- 8
- Library starting quantity
- 300ng
- Average fragment size
- 244
- Extraction method
- Animal tissue kit (Norgen Biotek cat#: 25700)
- Fragmentation methods
- chemical (NEBNext Ultra II Directional)
- Strand specificity
- Strand-specific (reverse)
- Spike-ins datasets
- ENCSR597UQL
- Platform
- Illumina HiSeq 2500
Attribution
ENCODE4 project
- Lab
- Barbara Wold, Caltech
- Award
- UM1HG009443 (Barbara Wold, Caltech)
- Project
- ENCODE
- External resources
- Aliases
- barbara-wold:w61_colon_mucosa_27
- Date submitted
- February 29, 2020
- Date released
- January 4, 2021
- Annotation (physical modeling)
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Homo sapiens female adult (41 years) colonic mucosa tissue, preserved by flash-freezing | ENCBS205RQN | ENCLB273OUK |