Experiment summary for ENCSR184IQF
doi:10.17989/ENCSR184IQF
Summary
- Status
- revoked
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- SHOX2
- Biosample summary
- Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens SHOX2
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- eGFP-SHOX2 ChIP-seq on human K562
- Nucleic acid type
- DNA
- Size range
- 250-450
- Fragmentation methods
- sonication (Bioruptor Pico)
- Controls
Attribution
ENCODE4 project
- Lab
- Michael Snyder, Stanford
- Award
- UM1HG009442 (Michael Snyder, Stanford)
- Project
- ENCODE
- External resources
- Aliases
- michael-snyder:pCS-146, michael-snyder:pCS-eGFP-SHOX2 K562 ChIP
- Date submitted
- December 22, 2018
- Date released
- August 3, 2020
- Annotation (gkmsvm-model)
- Submitter comment
- This dataset has been revoked because the biosamples lack a compliant biosample characterization.
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
|---|---|---|---|---|---|---|
| 1 | 1 | Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting H. sapiens SHOX2 | ENCBS517XBC | ENCGM563DKM | ENCAB728YTO | ENCLB260THE |
| 2 | 1 | Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting H. sapiens SHOX2 | ENCBS089ARY | ENCGM563DKM | ENCAB728YTO | ENCLB961IAO |