Experiment summary for ENCSR125DKL
doi:10.17989/ENCSR125DKL
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- CTCF
- Biosample summary
- Homo sapiens SU-DHL-6
- Biosample Type
- cell line
- Replication type
- isogenic
- Nucleic acid type
- DNA
- Size range
- 200-600
- Fragmentation methods
- sonication (generic)
- Platform
- Illumina HiSeq 2000, Illumina HiSeq 2500
- Controls
Attribution
ENCODE3 project
- Lab
- Bradley Bernstein, Broad
- Award
- U54HG006991 (Bradley Bernstein, Broad)
- Project
- ENCODE
- External resources
- Aliases
- bradley-bernstein:Project Element 304
- Date submitted
- March 19, 2014
- Date released
- November 29, 2017
- Reference Epigenome
- ENCSR527VKE
- Annotation (gkmsvm-model)
- Annotation (BPNet-model)
- Submitter comment
- As of March 1st, 2018, this experiment is being re-run on a new ENCODE ChIP-seq pipeline.
- Registry of cCREs
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
---|---|---|---|---|---|
2 | 1 | Homo sapiens SU-DHL-6 cell line | ENCBS107PVI | ENCAB000AXX | ENCLB881BYS |
1 | 1 | Homo sapiens SU-DHL-6 cell line | ENCBS136LHJ | ENCAB000AXX | ENCLB767EGU |