Experiment summary for ENCSR078QIH
doi:10.17989/ENCSR078QIH
Summary
- Status
- released
- Assay
- RNA-seq (total RNA-seq)
- Target
- ceh-31
- Biosample summary
- Caenorhabditis elegans strain YL621 (ceh-31(tm239)X) whole organism hermaphrodite 80 minutes post synchronization using egg bleaching genetically modified (mutagenesis) using mutagen treatment targeting C. elegans ceh-31
- Biosample Type
- whole organisms
- Replication type
- unreplicated
- Nucleic acid type
- RNA
- Depleted in
- rRNA
- Size range
- 350-600
- Extraction method
- Trizol
- Fragmentation methods
- shearing (Covaris generic)
- Strand specificity
- unstranded
- Platform
- Illumina NextSeq 500
Attribution
modERN project
- Lab
- Robert Waterston, UW
- Award
- U41HG007355 (Robert Waterston, UW)
- Project
- modERN
- Aliases
- robert-waterston:experiment_tm239_80_1
- Date submitted
- July 9, 2016
- Date released
- March 22, 2019
- Organism Development Series
- ENCSR100MRQ
- Submitter comment
- Analysis of this data is in progress
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 1 | 1 | Caenorhabditis elegans strain YL621 (ceh-31(tm239)X) hermaphrodite 80 minutes post synchronization using egg bleaching whole organism genetically modified (mutagenesis) using mutagen treatment targeting C. elegans ceh-31 | ENCBS411QWL | ENCGM007YXO | ENCLB830VMA |