Experiment summary for ENCSR055BAQ
doi:10.17989/ENCSR055BAQ
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- CG1621
- Biosample summary
- Drosophila melanogaster strain CG1621 whole organism prepupa (24 hours) genetically modified (insertion) using site-specific recombination targeting D. melanogaster Coop
- Biosample Type
- whole organisms
- Replication type
- isogenic
- Description
- Input control for ChIP-seq on transgenic flies expressing CG1621-eGFP fusion proteins.
- Nucleic acid type
- DNA
- Size range
- 200-800
- Fragmentation methods
- sonication (Bioruptor generic)
- Size selection method
- SPRI beads
- Platform
- Illumina HiSeq 4000
- Controls
Attribution
modERN project
- Lab
- Kevin White, UChicago
- Award
- U41HG007355 (Robert Waterston, UW)
- Project
- modERN
- External resources
- Aliases
- kevin-white:CG1621-GFP
- Date submitted
- May 29, 2018
- Date released
- June 12, 2018
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
|---|---|---|---|---|---|---|
| 2 | 1 | Drosophila melanogaster strain CG1621 mixed sex prepupa (24 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster Coop | ENCBS601HKS | ENCGM931ADL | ENCAB728YTO | ENCLB122ZBQ |
| 3 | 1 | Drosophila melanogaster strain CG1621 mixed sex prepupa (24 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster Coop | ENCBS345LOU | ENCGM931ADL | ENCAB728YTO | ENCLB833KGC |
| 1 | 1 | Drosophila melanogaster strain CG1621 mixed sex prepupa (24 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster Coop | ENCBS038WFI | ENCGM931ADL | ENCAB728YTO | ENCLB403QNJ |