Experiment summary for ENCSR010TRT

Summary

Status
released
Assay
ChIP-seq
Target
Control
Biosample summary
Caenorhabditis elegans strain OP677 (unc-119(tm4063) III; wgIs677) whole organism late embryo 6 hours post synchronization using egg bleaching genetically modified using bombardment
Biosample Type
whole organisms
Replication type
unreplicated
Description
This is the ChIP-seq control of transgenic worms expressing CHE-1-eGFP fusion proteins.
Nucleic acid type
DNA
Fragmentation method
sonication (generic microtip)
Size selection method
SPRI
Strand specificity
Non-strand-specific

Attribution

modERN project
Lab
Valerie Reinke, Yale
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
Aliases
kevin-white:CHE-1-OP677-LE-INPUT
Date submitted
October 4, 2016
Date released
October 27, 2016

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleModificationsLibrary
11strain OP677 (unc-119(tm4063) III; wgIs677) mixed sex late embryo 6 hours post synchronization using egg bleaching whole organism genetically modified (insertion) using bombardment targeting eGFP-che-1ENCBS766MBNENCGM329MLIENCLB111YFG