Experiment summary for ENCSR000EKN
doi:10.17989/ENCSR000EKN
Summary
- Status
- released
- Assay
- DNase-seq
- Biosample summary
- Homo sapiens K562 treated with 1 μM vorinostat for 72 hours
- Biosample Type
- cell line
- Replication type
- unreplicated
- Description
- DNase-seq on human K562 treated with SAHA at 1uM for 72 hour
- Treatments
- 1 μM vorinostat (CHEBI:45716) for 72 hours
- Nucleic acid type
- DNA
- Fragmentation methods
- see document
- Platform
- Illumina Genome Analyzer
Attribution
ENCODE2 project
- Lab
- Gregory Crawford, Duke
- Award
- U54HG004563 (Gregory Crawford, Duke)
- Project
- ENCODE
- External resources
- Date submitted
- January 11, 2011
- Date released
- August 28, 2012
- Annotation (gkmsvm-model)
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Homo sapiens K562 cell line treated with 1 μM vorinostat for 72 hours | ENCBS778AAA | ENCLB072EIY |
| 1 | 3 | Homo sapiens K562 cell line treated with 1 μM vorinostat for 72 hours | ENCBS778AAA | ENCLB242DXA |
| 1 | 2 | Homo sapiens K562 cell line treated with 1 μM vorinostat for 72 hours | ENCBS778AAA | ENCLB929IGK |