Experiment summary for ENCSR000EGL
doi:10.17989/ENCSR000EGL
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- IRF1
- Biosample summary
- Homo sapiens K562 treated with interferon alpha for 6 hours
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- IRF1 ChIP-seq on human K562 treated with IFNa6h produced by the Snyder lab
- Treatments
- interferon alpha (CHEBI:50847) for 6 hours
- Nucleic acid type
- DNA
- Fragmentation methods
- see document
- Platform
- Illumina Genome Analyzer
- Controls
Attribution
ENCODE2 project
- Lab
- Michael Snyder, Stanford
- Award
- U54HG004558 (Michael Snyder, Stanford)
- Project
- ENCODE
- External resources
- Date submitted
- May 14, 2012
- Date released
- May 14, 2012
- Annotation (gkmsvm-model)
- Annotation (BPNet-model)
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
---|---|---|---|---|---|
2 | 1 | Homo sapiens K562 cell line treated with interferon alpha for 6 hours | ENCBS787AAA | ENCAB000AHX | ENCLB209ASN |
1 | 1 | Homo sapiens K562 cell line treated with interferon alpha for 6 hours | ENCBS787AAA | ENCAB000AHX | ENCLB209ASM |