Experiment summary for ENCSR000EAG

doi:10.17989/ENCSR000EAG

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
RELA
Biosample summary
Homo sapiens GM12878 treated with 25 ng/mL tumor necrosis factor for 6 hours
Biosample Type
cell line
Replication type
isogenic
Description
RELA ChIP-seq on human GM12878 treated with TNFa
Treatments
25 ng/mL tumor necrosis factor (UniProtKB:P01375) for 6 hours
Nucleic acid type
DNA
Fragmentation methods
see document
Controls

Attribution

ENCODE2 project
Lab
Michael Snyder, Stanford
Award
U54HG004558 (Michael Snyder, Stanford)
Project
ENCODE
Date submitted
May 14, 2012
Date released
May 14, 2012
Tags
Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag ENCYCLOPEDIAv4Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag ENCYCLOPEDIAv5

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
21Homo sapiens GM12878 cell line treated with 25 ng/mL tumor necrosis factor for 6 hoursENCBS853AAAENCAB000AJGENCLB209AQJ
31Homo sapiens GM12878 cell line treated with 25 ng/mL tumor necrosis factor for 6 hoursENCBS853AAAENCAB000AJGENCLB209AQI
41Homo sapiens GM12878 cell line treated with 25 ng/mL tumor necrosis factor for 6 hoursENCBS853AAAENCAB000AJGENCLB209ATS
11Homo sapiens GM12878 cell line treated with 25 ng/mL tumor necrosis factor for 6 hoursENCBS853AAAENCAB000AJGENCLB209ATJ