Experiment summary for ENCSR000DXL

Summary

Status
released
Assay
ChIP-seq (Histone ChIP-seq)
Target
H3K4me3
Biosample summary
Homo sapiens SK-N-MC
Biosample Type
cell line
Replication type
isogenic
Description
H3K4me3 ChIP-seq on human SK-N-MC
Nucleic acid type
DNA
Fragmentation methods
see document
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE2 project
Lab
John Stamatoyannopoulos, UW
Award
U54HG004592 (John Stamatoyannopoulos, UW)
Project
ENCODE
Date submitted
June 25, 2011
Date released
November 17, 2011
Submitter comment
ChIP-seq against H3K4me3 using SK-N-MC cell line which was previously described as a neuroepithelioma (ATCC HTB-10). However recent evidence reveals it is Ewing's Sarcoma (www.ncbi.nlm.nih.gov/pubmed/15548687, www.ncbi.nlm.nih.gov/biosample/3151999, www.ncbi.nlm.nih.gov/pubmed/25453903).
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv5Search for all Experiment with internal tag ccre_inputv2Search for all Experiment with internal tag ENCYCLOPEDIAv4

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11SK-N-MC cell lineENCBS400ENCENCAB000ARBENCLB655NRM
21SK-N-MC cell lineENCBS366AETENCAB000ARBENCLB915FVA